Webb5 maj 2024 · We present STARsolo , a comprehensive turnkey solution for quantifying gene expression in single-cell/nucleus RNA-seq data, built into RNA-seq aligner STAR . Using … WebbBut as soon as I run STARsolo, I am facing a lot of issues. One of them ist, that despite of having two groups with each 300 cells, STARsolo creates a matrix.mtx where the read mapping is only taking place for the first cell! So all the other cells are excluded. command:

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WebbJob starsolo_count.run_starsolo:NA:1 exited with return code 1 which has not been declared as a valid return code. See 'continueOnReturnCode' runtime attribute for more details. · Issue #1825 · alexdobin/STAR · GitHub Job starsolo_count.run_starsolo:NA:1 exited with return code 1 which has not been declared as a valid return code. Webblinux-64 v2.7.10b; osx-64 v2.7.10b; conda install To install this package run one of the following: conda install -c bioconda star conda install -c "bioconda/label/cf202401" star the highdown inn

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WebbGitHub - dobinlab/STARsoloManuscript: Code for analyses in the STARsolo manuscript dobinlab / STARsoloManuscript Public Notifications Fork 1 Star 7 Code Issues Pull … Webb5 maj 2024 · We present STARsolo, a comprehensive turnkey solution for quantifying gene expression in single-cell/nucleus RNA-seq data, built into RNA-seq aligner STAR. Using … WebbSTAR source code and binaries can be downloaded from GitHub: named releases from https: //github.com/alexdobin/STAR/releases, or the master branch from … the beatles decorations